Transcript: lnc-TIPARP-2:1

Basic information

LNCipedia transcript ID: lnc-TIPARP-2:1 
LNCipedia gene ID: lnc-TIPARP-2
Location (hg19): chr3:156455820-156459241
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 739 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2510_chr3:156455819-156459241_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.3559 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIPARP-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIPARP-2:1
4.0 lnc-TIPARP-2:1
4.1 lnc-TIPARP-2:1
5.0 lnc-TIPARP-2:1
5.1 lnc-LEKR1-7:1
5.2 lnc-TIPARP-2:1