Transcript: lnc-TKFC-1:1

Basic information

LNCipedia transcript ID: lnc-TKFC-1:1 
LNCipedia gene ID: lnc-TKFC-1
Location (hg19): chr11:61112542-61131593
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2344 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001nry_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 18.732 non-coding 
CPAT coding probability 30.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TKFC-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DAK-1:1
4.0 lnc-TMEM138-1:3
4.1 lnc-TMEM138-1:3
5.0 lnc-TMEM138-1:3
5.1 lnc-MS4A18-22:1
5.2 lnc-TKFC-1:1