Transcript: lnc-TKT-1:10

Basic information

LNCipedia transcript ID: lnc-TKT-1:10 
LNCipedia gene ID: lnc-TKT-1
Location (hg19): chr3:53317449-53319252
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1806 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT089991
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.1147 non-coding 
CPAT coding probability 18.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TKT-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TKT-1:10
4.0 lnc-TKT-1:10
4.1 lnc-TKT-1:10
5.0 lnc-TKT-1:10
5.1 lnc-ACTR8-7:1
5.2 lnc-TKT-1:10