Transcript: lnc-TLK1-8:1

Basic information

LNCipedia transcript ID: lnc-TLK1-8:1 
LNCipedia gene ID: lnc-TLK1-8
Location (hg19): chr2:171287965-171335522
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2026 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ugf_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.6831 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLK1-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-6:1
4.0 lnc-AC007405.2.1-6:1
4.1 lnc-AC007405.2.1-6:1
5.0 lnc-AC007405.2.1-6:1
5.1 lnc-METTL5-3:1
5.2 lnc-TLK1-8:1