Transcript: lnc-TLNRD1-3:2

Basic information

LNCipedia transcript ID: lnc-TLNRD1-3:2 
LNCipedia gene ID: lnc-TLNRD1-3
Location (hg19): chr15:81282389-81282976
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 588 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000023809.1|FTMT26000003248.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -274.4302 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLNRD1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MESDC1-3:2
5.0 lnc-MESDC1-3:2
5.1 lnc-CFAP161-3:2
5.2 lnc-TLNRD1-3:2