Transcript: lnc-TLR6-2:2

Basic information

LNCipedia transcript ID: lnc-TLR6-2:2 
LNCipedia gene ID: lnc-TLR6-2
Location (hg19): chr4:39000080-39034027
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 550 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT096065
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.9952 non-coding 
CPAT coding probability 19.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLR6-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TLR1-2:2
4.0 lnc-TLR6-2:2
4.1 lnc-TLR6-2:2
5.0 lnc-TLR6-2:2
5.1 lnc-GABRA4-55:2
5.2 lnc-TLR6-2:2