Transcript: lnc-TM4SF19-TCTEX1D2-4:1

Basic information

LNCipedia transcript ID: lnc-TM4SF19-TCTEX1D2-4:1 
LNCipedia gene ID: lnc-TM4SF19-TCTEX1D2-4
RefSeq ID: NR_037950
Location (hg19): chr3:196042956-196065291
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1008 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037950; NR_037950.1
Alternative gene names: TM4SF19-TCTEX1D2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1274.2269 coding 
CPAT coding probability 96.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TM4SF19-TCTEX1D2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCYT1A-4:1
4.0 lnc-TCTEX1D2-4:1
4.1 lnc-TCTEX1D2-4:1
5.0 lnc-TCTEX1D2-4:1
5.1 lnc-TCTEX1D2-4:1
5.2 lnc-TM4SF19-TCTEX1D2-4:1