Transcript: lnc-TM4SF19-TCTEX1D2-4:2

Basic information

LNCipedia transcript ID: lnc-TM4SF19-TCTEX1D2-4:2 
LNCipedia gene ID: lnc-TM4SF19-TCTEX1D2-4
Location (hg19): chr3:196042965-196045101
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 326 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT094324
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -330.1248 non-coding 
CPAT coding probability 66.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TM4SF19-TCTEX1D2-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCYT1A-4:2
4.0 lnc-TCTEX1D2-4:2
4.1 lnc-TCTEX1D2-4:2
5.0 lnc-TCTEX1D2-4:2
5.1 lnc-TCTEX1D2-4:2
5.2 lnc-TM4SF19-TCTEX1D2-4:2