Transcript: lnc-TM6SF2-1:2

Basic information

LNCipedia transcript ID: lnc-TM6SF2-1:2 
LNCipedia gene ID: lnc-TM6SF2-1
Location (hg19): chr19:19366451-19384178
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4515 bp
Exons: 12
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000586064.2
Alternative gene names: ENSG00000267629.2; AC138430.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5878.5619 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TM6SF2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TM6SF2-1:2
4.0 lnc-TM6SF2-1:2
4.1 lnc-TM6SF2-1:2
5.0 lnc-TM6SF2-1:2
5.1 lnc-PALM3-145:5
5.2 lnc-TM6SF2-1:2