Transcript: lnc-TMCC1-12:4

Basic information

LNCipedia transcript ID: lnc-TMCC1-12:4 
LNCipedia gene ID: lnc-TMCC1-12
Location (hg19): chr3:129985909-129995465
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 274 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006656; NONHSAT092111
Alternative gene names: XLOC_003250; linc-TMCC1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMCC1-12:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMCC1-4:4
3.1 lnc-TMCC1-4:4
4.0 lnc-TMCC1-12:4
4.1 lnc-TMCC1-12:4
5.0 lnc-TMCC1-12:4
5.1 lnc-H1FX-17:4
5.2 lnc-TMCC1-12:4