Transcript: lnc-TMCC1-4:6

Basic information

LNCipedia transcript ID: lnc-TMCC1-4:6 
LNCipedia gene ID: lnc-TMCC1-4
Location (hg19): chr3:129547294-129612418
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 533 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT092073
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.2477 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMCC1-4:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLXND1-4:2
4.0 lnc-TMCC1-4:6
4.1 lnc-TMCC1-4:6
5.0 lnc-TMCC1-4:6
5.1 lnc-H1FX-12:2
5.2 lnc-TMCC1-4:6