Transcript: lnc-TMEM100-5:1

Basic information

LNCipedia transcript ID: lnc-TMEM100-5:1 
LNCipedia gene ID: lnc-TMEM100-5
Location (hg19): chr17:53761233-53761545
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 313 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr17_9856_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.8249 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM100-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM100-5:1
4.0 lnc-TMEM100-5:1
4.1 lnc-TMEM100-5:1
5.0 lnc-TMEM100-5:1
5.1 lnc-PTRH2-62:1
5.2 lnc-TMEM100-5:1