Transcript: lnc-TMEM105-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM105-1:1 
LNCipedia gene ID: lnc-TMEM105-1
Location (hg19): chr17:78313698-79329659
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2410 bp
Exons: 5
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000505044
Alternative gene names: ENSG00000250297


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.193 coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM105-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM105-1:1
3.1 lnc-TMEM105-1:1
4.0 lnc-TMEM105-1:1
4.1 lnc-TMEM105-1:1
5.0 lnc-TMEM105-1:1
5.1 lnc-SGSH-27:1
5.2 lnc-TMEM105-1:1