Transcript: lnc-TMEM105-4:1

Basic information

LNCipedia transcript ID: lnc-TMEM105-4:1 
LNCipedia gene ID: lnc-TMEM105-4
Location (hg19): chr17:79369409-79370944
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1536 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT056487
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.2104 non-coding 
CPAT coding probability 20.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM105-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM105-4:1
4.0 lnc-TMEM105-4:1
4.1 lnc-TMEM105-4:1
5.0 lnc-TMEM105-4:1
5.1 lnc-NPLOC4-12:3
5.2 lnc-TMEM105-4:1