Transcript: lnc-TMEM105-4:3

Basic information

LNCipedia transcript ID: lnc-TMEM105-4:3 
LNCipedia gene ID: lnc-TMEM105-4
Location (hg19): chr17:79369082-79370968
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1618 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262877.3|MICT00000156452.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.2104 non-coding 
CPAT coding probability 3.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM105-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM105-4:3
5.0 lnc-TMEM105-4:3
5.1 lnc-NPLOC4-12:1
5.2 lnc-TMEM105-4:3