Transcript: lnc-TMEM109-1:7

Basic information

LNCipedia transcript ID: lnc-TMEM109-1:7 
LNCipedia gene ID: lnc-TMEM109-1
Location (hg19): chr11:60693176-60694115
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 446 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT021610
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -219.4665 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM109-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM132A-1:4
4.0 lnc-TMEM132A-1:4
4.1 lnc-TMEM132A-1:4
5.0 lnc-TMEM132A-1:4
5.1 lnc-MS4A18-4:4
5.2 lnc-TMEM109-1:7