Transcript: lnc-TMEM114-3:2

Basic information

LNCipedia transcript ID: lnc-TMEM114-3:2 
LNCipedia gene ID: lnc-TMEM114-3
Location (hg19): chr16:7921548-7944375
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 448 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140378; FPKM1_group_11207_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -294.6628 non-coding 
CPAT coding probability 8.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM114-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM114-3:2
4.0 lnc-TMEM114-3:2
4.1 lnc-TMEM114-3:2
5.0 lnc-TMEM114-3:2
5.1 lnc-SEPT12-61:2
5.2 lnc-TMEM114-3:2