Transcript: lnc-TMEM123-6:1

Basic information

LNCipedia transcript ID: lnc-TMEM123-6:1 
LNCipedia gene ID: lnc-TMEM123-6
Location (hg19): chr11:102172152-102193472
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 240 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000006747.1|FTMT24100036879.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.2177 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM123-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM123-6:1
5.0 lnc-TMEM123-6:1
5.1 lnc-MMP27-7:1
5.2 lnc-TMEM123-6:1