Transcript: lnc-TMEM132B-12:2

Basic information

LNCipedia transcript ID: lnc-TMEM132B-12:2 
LNCipedia gene ID: lnc-TMEM132B-12
Location (hg19): chr12:127359391-127373237
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 364 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00020639
Alternative gene names: XLOC_009941; linc-TMEM132C-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.8667 non-coding 
CPAT coding probability 3.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM132B-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132B-12:2
3.1 lnc-TMEM132B-12:2
4.0 lnc-TMEM132B-12:2
4.1 lnc-TMEM132B-12:2
5.0 lnc-TMEM132B-12:2
5.1 lnc-RFLNA-32:5
5.2 lnc-TMEM132B-12:2