Transcript: lnc-TMEM132C-6:2

Basic information

LNCipedia transcript ID: lnc-TMEM132C-6:2 
LNCipedia gene ID: lnc-TMEM132C-6
Location (hg19): chr12:127630756-127637090
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1028 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00020643
Alternative gene names: XLOC_009944; linc-TMEM132C-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.9106 non-coding 
CPAT coding probability 8.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM132C-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132C-6:2
3.1 lnc-TMEM132C-6:2
4.0 lnc-TMEM132C-6:2
4.1 lnc-TMEM132C-6:2
5.0 lnc-TMEM132C-6:2
5.1 lnc-RFLNA-35:7
5.2 lnc-TMEM132C-6:2