Transcript: lnc-TMEM167A-4:4

Basic information

LNCipedia transcript ID: lnc-TMEM167A-4:4 
LNCipedia gene ID: lnc-TMEM167A-4
Location (hg19): chr5:82352703-82373682
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 562 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT102511
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.8618 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM167A-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAPLN1-4:1
4.0 lnc-TMEM167A-4:4
4.1 lnc-TMEM167A-4:4
5.0 lnc-TMEM167A-4:4
5.1 lnc-ANKRD34B-55:1
5.2 lnc-TMEM167A-4:4