Transcript: lnc-TMEM167A-4:7

Basic information

LNCipedia transcript ID: lnc-TMEM167A-4:7 
LNCipedia gene ID: lnc-TMEM167A-4
Location (hg19): chr5:82349881-82373186
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3353 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT102508
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.7461 non-coding 
CPAT coding probability 4.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM167A-4:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAPLN1-4:4
4.0 lnc-TMEM167A-4:7
4.1 lnc-TMEM167A-4:7
5.0 lnc-TMEM167A-4:7
5.1 lnc-ANKRD34B-55:4
5.2 lnc-TMEM167A-4:7