Transcript: lnc-TMEM168-2:2

Basic information

LNCipedia transcript ID: lnc-TMEM168-2:2 
LNCipedia gene ID: lnc-TMEM168-2
Location (hg19): chr7:112378965-112422989
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4199 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_3466_chr7:112378964-112384413_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 311.2945 coding 
CPAT coding probability 10.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM168-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf60-2:2
4.0 lnc-TMEM168-2:2
4.1 lnc-TMEM168-2:2
5.0 lnc-TMEM168-2:2
5.1 lnc-TFEC-39:1
5.2 lnc-TMEM168-2:2