Transcript: lnc-TMEM170B-2:7

Basic information

LNCipedia transcript ID: lnc-TMEM170B-2:7 
LNCipedia gene ID: lnc-TMEM170B-2
Location (hg19): chr6:11487463-11516747
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1486 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT107755
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.2076 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM170B-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM170B-2:7
4.0 lnc-TMEM170B-2:7
4.1 lnc-TMEM170B-2:7
5.0 lnc-TMEM170B-2:7
5.1 lnc-PRPF4B-125:8
5.2 lnc-TMEM170B-2:7