Transcript: lnc-TMEM178A-6:1

Basic information

LNCipedia transcript ID: lnc-TMEM178A-6:1 
LNCipedia gene ID: lnc-TMEM178A-6
Location (hg19): chr2:40739062-40740133
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1072 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000042543.1|ENCT00000222855.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.0571 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM178A-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM178-6:2
5.0 lnc-TMEM178-6:2
5.1 lnc-EPAS1-58:1
5.2 lnc-TMEM178A-6:1