Transcript: lnc-TMEM178B-3:4

Basic information

LNCipedia transcript ID: lnc-TMEM178B-3:4 
LNCipedia gene ID: lnc-TMEM178B-3
Location (hg19): chr7:140624892-140713978
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1277 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000094268.1|ENCT00000406097.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.2609 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM178B-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-744I24.1.1-3:4
5.0 lnc-RP11-744I24.1.1-3:4
5.1 lnc-ADCK2-3:4
5.2 lnc-TMEM178B-3:4