Transcript: lnc-TMEM185B-10:4

Basic information

LNCipedia transcript ID: lnc-TMEM185B-10:4 
LNCipedia gene ID: lnc-TMEM185B-10
Location (hg19): chr2:120992243-121003685
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3649 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000049817.1|MICT00000197925.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3131 non-coding 
CPAT coding probability 9.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM185B-10:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM185B-10:4
5.0 lnc-TMEM185B-10:4
5.1 lnc-SCTR-10:1
5.2 lnc-TMEM185B-10:4