Transcript: lnc-TMEM189-UBE2V1-4:9

Basic information

LNCipedia transcript ID: lnc-TMEM189-UBE2V1-4:9 
LNCipedia gene ID: lnc-TMEM189-UBE2V1-4
Location (hg19): chr20:48711481-48729683
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 628 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT080263
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.676 non-coding 
CPAT coding probability 20.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM189-UBE2V1-4:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM189-UBE2V1-4:9
4.0 lnc-TMEM189-UBE2V1-4:9
4.1 lnc-TMEM189-UBE2V1-4:9
5.0 lnc-TMEM189-UBE2V1-4:9
5.1 lnc-SPATA2-4:10
5.2 lnc-TMEM189-UBE2V1-4:9