Transcript: lnc-TMEM212-1:11

Basic information

LNCipedia transcript ID: lnc-TMEM212-1:11 
LNCipedia gene ID: lnc-TMEM212-1
Location (hg19): chr3:171178733-171187507
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 586 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000062805.1|FTMT21100001761.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -205.6137 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM212-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM212-1:11
5.0 lnc-TMEM212-1:11
5.1 lnc-ECT2-25:9
5.2 lnc-TMEM212-1:11