Transcript: lnc-TMEM238L-16:6

Basic information

LNCipedia transcript ID: lnc-TMEM238L-16:6 
LNCipedia gene ID: lnc-TMEM238L-16
Location (hg19): chr17:10698230-10707354
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1468 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000379770
Alternative gene names: ENSG00000205351; AC002347.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 781.8725 coding 
CPAT coding probability 15.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM238L-16:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIRT-1:1
3.1 lnc-PIRT-1:3
4.0 LINC00675:4
4.1 LINC00675:4
5.0 LINC00675:4
5.1 lnc-GAS7-16:6
5.2 lnc-TMEM238L-16:6