Transcript: lnc-TMEM242-10:2

Basic information

LNCipedia transcript ID: lnc-TMEM242-10:2 
LNCipedia gene ID: lnc-TMEM242-10
Location (hg19): chr6:157832011-157849908
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 16222 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000090637.1|MICT00000314219.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 42.2114 non-coding 
CPAT coding probability 4.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM242-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM242-10:2
5.0 lnc-TMEM242-10:2
5.1 lnc-DYNLT1-17:1
5.2 lnc-TMEM242-10:2