Transcript: lnc-TMEM248-2:3

Basic information

LNCipedia transcript ID: lnc-TMEM248-2:3 
LNCipedia gene ID: lnc-TMEM248-2
Location (hg19): chr7:66369501-66371238
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1738 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1233:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.0395 non-coding 
CPAT coding probability 14.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM248-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C7orf42-2:2
4.1 lnc-C7orf42-2:2
5.0 lnc-C7orf42-2:2
5.1 lnc-TPST1-22:3
5.2 lnc-TMEM248-2:3