Transcript: lnc-TMEM255B-5:25

Basic information

LNCipedia transcript ID: lnc-TMEM255B-5:25 
LNCipedia gene ID: lnc-TMEM255B-5
Location (hg19): chr13:114600482-114601872
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 446 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229373.4|ENCT00000116533.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.1717 non-coding 
CPAT coding probability 4.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM255B-5:25 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM70B-5:10
5.0 lnc-FAM70B-5:10
5.1 lnc-TMEM255B-5:6
5.2 lnc-TMEM255B-5:25