Transcript: lnc-TMEM26-3:2

Basic information

LNCipedia transcript ID: lnc-TMEM26-3:2 
LNCipedia gene ID: lnc-TMEM26-3
Ensembl Gene ID: ENSG00000233643
Ensembl Transcript ID: ENST00000441001
Location (hg19): chr10:63541503-63581004
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 510 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT013569; ENST00000441001.2
Alternative gene names: ENSG00000233643.2; RP11-491H19.1; AC022398.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.8645 non-coding 
CPAT coding probability 10.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM26-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTKN2-3:4
4.0 lnc-TMEM26-3:2
4.1 lnc-TMEM26-3:2
5.0 lnc-TMEM26-3:2
5.1 lnc-MBL2-41:3
5.2 lnc-TMEM26-3:2