Transcript: lnc-TMEM30B-9:2

Basic information

LNCipedia transcript ID: lnc-TMEM30B-9:2 
LNCipedia gene ID: lnc-TMEM30B-9
Location (hg19): chr14:62214090-62215283
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1194 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT037282
Alternative gene names: 3'aHIF-1A; aHIF


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0722 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM30B-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM30B-7:2
4.0 HIF1A-AS2:2
4.1 HIF1A-AS2:2
5.0 HIF1A-AS2:2
5.1 lnc-DHRS7-19:2
5.2 lnc-TMEM30B-9:2