Transcript: lnc-TMEM41B-5:1

Basic information

LNCipedia transcript ID: lnc-TMEM41B-5:1 
LNCipedia gene ID: lnc-TMEM41B-5
RefSeq ID: NR_036539
Location (hg19): chr11:9481103-9482245
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1143 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT017922; NR_036539; NR_036539.1
Alternative gene names: LOC644656


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.8445 non-coding 
CPAT coding probability 7.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM41B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM41B-5:1
4.0 lnc-TMEM41B-5:1
4.1 lnc-TMEM41B-5:1
5.0 lnc-TMEM41B-5:1
5.1 lnc-C11orf16-5:2
5.2 lnc-TMEM41B-5:1