Transcript: lnc-TMEM68-4:1

Basic information

LNCipedia transcript ID: lnc-TMEM68-4:1 
LNCipedia gene ID: lnc-TMEM68-4
Ensembl Gene ID: ENSG00000253976
Ensembl Transcript ID: ENST00000522186
Location (hg19): chr8:56047763-56054918
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 813 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000522186.1
Alternative gene names: ENSG00000253976.1; RP11-386G21.1; AC022679.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -217.1793 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM68-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-386G21.1.1-1:1
4.1 lnc-RP11-386G21.1.1-1:1
5.0 lnc-RP11-386G21.1.1-1:1
5.1 lnc-IMPAD1-32:1
5.2 lnc-TMEM68-4:1