Transcript: lnc-TMEM8A-6:1

Basic information

LNCipedia transcript ID: lnc-TMEM8A-6:1 
LNCipedia gene ID: lnc-TMEM8A-6
Location (hg19): chr16:471171-475556
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 4386 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028383.1|ENCT00000162299.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 38.1804 non-coding 
CPAT coding probability 12.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM8A-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM8A-1:2
5.0 lnc-TMEM8A-1:2
5.1 lnc-PKMYT1-135:1
5.2 lnc-TMEM8A-6:1