Transcript: lnc-TMEM99-5:1

Basic information

LNCipedia transcript ID: lnc-TMEM99-5:1 
LNCipedia gene ID: lnc-TMEM99-5
Location (hg19): chr17:38804774-38806823
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1281 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499202
Alternative gene names: ENSG00000245667


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.4777 non-coding 
CPAT coding probability 3.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM99-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM99-3:1
3.1 lnc-TMEM99-5:1
4.0 lnc-TMEM99-5:1
4.1 lnc-TMEM99-5:1
5.0 lnc-TMEM99-5:1
5.1 lnc-THRA-35:6
5.2 lnc-TMEM99-5:1