Transcript: lnc-TMPRSS15-19:2

Basic information

LNCipedia transcript ID: lnc-TMPRSS15-19:2 
LNCipedia gene ID: lnc-TMPRSS15-19
Location (hg19): chr21:21036785-21097287
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1940 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002yla_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.9792 non-coding 
CPAT coding probability 26.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMPRSS15-19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMPRSS15-19:2
4.0 lnc-TMPRSS15-19:2
4.1 lnc-TMPRSS15-19:2
5.0 lnc-TMPRSS15-19:2
5.1 lnc-N6AMT1-67:3
5.2 lnc-TMPRSS15-19:2