Transcript: lnc-TMSB4X-7:3

Basic information

LNCipedia transcript ID: lnc-TMSB4X-7:3 
LNCipedia gene ID: lnc-TMSB4X-7
Location (hg19): chrX:13300289-13305412
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 605 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3886_chrX:13300288-13305412_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.2776 non-coding 
CPAT coding probability 6.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMSB4X-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMSB4X-7:3
4.0 lnc-TMSB4X-7:3
4.1 lnc-TMSB4X-7:3
5.0 lnc-TMSB4X-7:3
5.1 lnc-GK-140:3
5.2 lnc-TMSB4X-7:3