Transcript: lnc-TNFRSF14-66:3

Basic information

LNCipedia transcript ID: lnc-TNFRSF14-66:3 
LNCipedia gene ID: lnc-TNFRSF14-66
Ensembl Gene ID: ENSG00000272449
Ensembl Transcript ID: ENST00000606645
Location (hg19): chr1:2477839-2478899
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1061 bp
Exons: 1
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606645.2
Alternative gene names: ENSG00000272449.2; AL139246.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.9512 non-coding 
CPAT coding probability 23.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNFRSF14-66:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-VAMP3-66:3
5.1 lnc-VAMP3-66:3
5.2 lnc-TNFRSF14-66:3