Transcript: lnc-TNK2-5:2

Basic information

LNCipedia transcript ID: lnc-TNK2-5:2 
LNCipedia gene ID: lnc-TNK2-5
Location (hg19): chr3:195662571-195665098
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2528 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1755:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 73.0695 coding 
CPAT coding probability 7.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TNK2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TNK2-5:2
4.1 lnc-TNK2-5:2
5.0 lnc-TNK2-5:2
5.1 lnc-MUC4-10:1
5.2 lnc-TNK2-5:2