Transcript: lnc-TNPO3-12:3

Basic information

LNCipedia transcript ID: lnc-TNPO3-12:3 
LNCipedia gene ID: lnc-TNPO3-12
Location (hg19): chr7:128508625-128509577
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 675 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT123265
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.1574 non-coding 
CPAT coding probability 9.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNPO3-12:3 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNPO3-6:3
4.0 lnc-TNPO3-6:3
4.1 lnc-TNPO3-1:37
5.0 lnc-TNPO3-1:37
5.1 lnc-UBE2H-16:3
5.2 lnc-TNPO3-12:3