Transcript: lnc-TNPO3-9:1

Basic information

LNCipedia transcript ID: lnc-TNPO3-9:1 
LNCipedia gene ID: lnc-TNPO3-9
Location (hg19): chr7:128592581-128593370
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 790 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000613068.1
Alternative gene names: ENSG00000275106.1; RP11-309L24.10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.8215 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNPO3-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TNPO3-9:1
4.1 lnc-TNPO3-9:1
5.0 lnc-TNPO3-9:1
5.1 lnc-UBE2H-13:1
5.2 lnc-TNPO3-9:1