Transcript: lnc-TOP3B-3:1

Basic information

LNCipedia transcript ID: lnc-TOP3B-3:1 
LNCipedia gene ID: lnc-TOP3B-3
Location (hg19): chr22:22473223-22478189
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 408 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT083745
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 46.246 non-coding 
CPAT coding probability 8.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TOP3B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOP3B-3:1
4.0 lnc-TOP3B-3:1
4.1 lnc-TOP3B-3:1
5.0 lnc-TOP3B-3:1
5.1 lnc-SCARF2-44:1
5.2 lnc-TOP3B-3:1