Transcript: lnc-TP53BP2-3:14

Basic information

LNCipedia transcript ID: lnc-TP53BP2-3:14 
LNCipedia gene ID: lnc-TP53BP2-3
Location (hg19): chr1:224098433-224099085
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 653 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expRegAs_chr1_21128_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.5561 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53BP2-3:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARP1-3:1
4.0 lnc-PARP1-3:1
4.1 lnc-PARP1-3:1
5.0 lnc-PARP1-3:1
5.1 lnc-LEFTY2-38:1
5.2 lnc-TP53BP2-3:14