Transcript: lnc-TP53BP2-8:3

Basic information

LNCipedia transcript ID: lnc-TP53BP2-8:3 
LNCipedia gene ID: lnc-TP53BP2-8
Location (hg19): chr1:224138369-224180271
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5666 bp
Exons: 12
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272645.1|HBMT00000086492.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 142.1219 coding 
CPAT coding probability 85.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TP53BP2-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TP53BP2-3:7
5.0 lnc-TP53BP2-3:7
5.1 lnc-LEFTY2-37:3
5.2 lnc-TP53BP2-8:3