Transcript: lnc-TP53TG3F-17:1

Basic information

LNCipedia transcript ID: lnc-TP53TG3F-17:1 
LNCipedia gene ID: lnc-TP53TG3F-17
Location (hg19): chr16:34427706-34428105
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT142163
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.2162 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3F-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2144E22.5.1-17:1
4.0 lnc-CTD-2144E22.5.1-17:1
4.1 lnc-CTD-2144E22.5.1-17:1
5.0 lnc-CTD-2144E22.5.1-17:1
5.1 lnc-ZNF646-121:1
5.2 lnc-TP53TG3F-17:1