Transcript: lnc-TPCN2-4:1

Basic information

LNCipedia transcript ID: lnc-TPCN2-4:1 
LNCipedia gene ID: lnc-TPCN2-4
Location (hg19): chr11:68763662-68764006
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 205 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019361; NONHSAT022557
Alternative gene names: XLOC_009187; linc-TPCN2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPCN2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPCN2-2:1
3.1 lnc-TPCN2-4:1
4.0 lnc-TPCN2-4:1
4.1 lnc-TPCN2-4:1
5.0 lnc-TPCN2-4:1
5.1 lnc-TCIRG1-20:2
5.2 lnc-TPCN2-4:1